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Three small ribooligonucleotides with specific arginine sites


Three small ribooligonucleotides with specific arginine sites.

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Arginine-binding RNA motifs are important to protein-RNA interaction and perhaps also for Archean biochemistry. Selection-amplification was used to isolate three RNAs that are eluted by free arginine from an L-arginine affinity column (Kd approximately 0.2-0.4 mM). The binding sites contain specific internal and bulge loops, whose sequences can include arginine coding triplets. Binding is highly specific for arginine, but all three motifs, like the self-splicing group I intron, also bind guanosine 5'-monophosphate. One site is stereoselective, somewhat preferring D-arginine.


Connell GJ, Illangesekare M, Yarus M

Biochemistry

1993-06-01 00:00

32

21

5497-502

Arginine,Base Sequence,Binding Sites,Kinetics,Molecular Sequence Data,Nucleic Acid Conformation,Oligoribonucleotides,Polymerase Chain Reaction,Structure-Activity Relationship,Oligoribonucleotides,Arginine

Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder 80309-0347

Biochemistry

NIGMS GM 30881

0006-2960




1487

True

8504070

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