MICROBIAL DIVERSITY AND THE BIOSPHERE

MCD BIOLOGY COURSE 4350 / 5350

End of the semester housekeeping:

-Final Papers are due Friday Dec 12 (hard copy in class AND electronic submission via turnitin.com)

-The final is Monday Dec 15, 10:30 AM to 1 PM

-Bring your questionnaire (handed out in class 12/5 or file at bottom of this page) to the final for 5 pts (please do not put your name on it).

 

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ARTICLESdA

PHYLOGENY WORKSHOP (updated 9-9)

Syllabus and Lectures:

Document

PDF file (Size)

Other links

Syllabus and Course Information

PDF (52 KB)

 

Lecture 1

PDF (124 KB)

 

Lecture 2

PDF (1.1 MB)

Woese Pics

Vignette: Prok Rant

PDF (.7 MB)

Articles

Lecture 3

PDF (.3 MB)

Lecture 4

PDF (.8 MB)

Vignette: Poisson Statistics

PDF (96 KB)

 

Kirk Harris: Tracking the Explosion

PDF (1.5 MB)

email Kirk

Side Note: 454 pyrosequencing (REDONE)

PDF (192 KB)

Roche video

Roche presentation

Lecture 5

PDF (.95 MB)

Lecture 6

PDF (1.7 MB)

Lecture 7

PDF (4.4 MB)

Lecture 8

PDF (2.1 MB)

Vignette: Environmental Crens

PDF (2.6 MB)

 

Vignette: Winogradsky

PDF (80 KB)

 

Chuck Robertson: Archaea

PDF (3.5 MB)

 

Lecture 9: Life in Hard Places

PDF (1 MB)

 

Lecture 10: A Bit About Archaea

PDF (.5 MB)

 

Dan Frank: Commensals

PDF (4.8 MB)

 

Dan Frank: Pathogens

PDF (4.8 MB)

 

Vignette: Biowarfare

PDF (68 KB)

Articles

Vignette: Probiotics

PDF (60 KB)

Articles

Lecture 11: Eucaryotes

PDF (6.5 MB)

Lecture 12: Eucaryotes

PDF (12MB)

Questionnaire in Word - Bring to Final for 5 pts.

.doc (40 KB)

Amino Acid Structure Guide (still need to know this)

PDF (284 KB)

 

~100 questions (test prep for the semester)

PDF (92 KB)